Training

Our genomics platform offers training workshops from time to time.

Our regular training program is listed below. If you would like to express interest in the listed courses or suggest other potential workshops. Contact our genomics platform team.

Related training and workshops can also be found on the digital research training page.

DIY workshops

The following workshop material is available for researchers to work through by themselves. If you need access to a unix computer, please contact ASK-ICT Unix support team (La Trobe login required)

Introduction to unix

Knowledge of the unix operating system is fundamental to being productive on HPC systems such as the LIMS-HPC. This workshop will introduce you to the fundamental Unix concepts by way of a series of hands-on exercises. In particular you will learn how to:

  • log into a unix machine remotely
  • organise your files into directories
  • change file permissions to improve security and safety
  • create and edit files with a text editor
  • copy files between directories
  • use command line programs to manipulate files
  • automate your workflow using shell scripts.

The workshop is intended for beginners with no prior experience in Unix, and is recommended as a prerequisite for other more advanced workshops.

Introduction to High-Performance Computing (HPC)

Using High Performance Computing (HPC) resources, such as the LIMS-HPC, in an effective and efficient manner is key to modern Research. This workshop will introduce you to HPC environments and getting on with research. In particular you will learn:

  • what is HPC?
  • loading software modules
  • submitting jobs
  • selecting job queues
  • monitoring your job’s progress
  • what resources can I request?
  • selecting appropriate resources.

Prerequisites: You will need a basic understanding of unix, or you should have attended an 'Introduction to Unix' workshop in the past.

Other Trainings and Workshops

The genomics platform frequently advertises our training sessions in the School of Agriculture, Biomedicine & Environment (SABE) Newsletter. Our staff and students are advised to refer to the newsletters for the latest training offerings.